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Bioremediation:Taking the Microbe's Perspective

Reducing Contaminant Concentrations with Bugs

 Bioremediation is rapidly becoming the remedy of choice at many contaminated sites. It seems simple: pump in oxygen, surfactants or nutrients (known as "biostimulation"), or microbes (known as "bioaugmentation"), or some combination and wait a few months. Sometimes there is a dramatic decrease in the contaminant concentrations. Many times the initial decrease is only temporary and the concentrations begin to rise again with time.


  The Silver Bullet - The problem is often not the remedy, it is the method. Engineers and hydrogeologists who use bioremediation as only one of many remedial techniques often do not know enough about subtle microbiological mechanisms to design the best bioremediation for a given site. Often, the "silver bullet" offered by adding genetically-engineered microbes, a surfactant, or oxygen is not the answer. And this force-fitting of a remedy often does not remediate every contaminant satisfactorily.


 No Walk-Away Remedy - Toxic contamination often kills much of the native ecological community. As the contamination begins to migrate from the source area, it undergoes transformations, both chemical and physical, which, as a rule, gradually reduce their concentrations. This is the basis for the "intrinsic bioremediation" or "monitored natural attenuation" remedy that is becoming so popular. Although sometimes misunderstood as a "walk-away" solution, natural attenuation instead relies on the delicately-balanced existing ecology. If not severely compromised by toxic concentrations of contaminants, the site will be able to clean itself. Under conditions of severe contamination or when a shorter timeframe is desired, Mother Nature can use some help, and an "engineered" bioremedial solution is needed. Do not confuse "engineered bioremediation" with "genetically-engineered microbes." The technique used by Waste Science Inc. (WSI) and Lambda Bioremediation Systems, Inc. (LBSI) does not use any genetically-engineered microbes, only microbes that are already found at the site (indigenous microbes). "Engineered bioremediation" means that scientists intervene to improve upon the natural processes that break down contaminants.


 Engineering a Remedy Not the Microbes - Advantages of engineered bioremediation over other types of engineered remedies are numerous, not the least of which is fewer moving parts to break down. The application of engineered bioremediation to a particular site must be evaluated by using site-specific data characterizing its geology, chemistry, and ecology. Employing an understanding of the role of each of the hundreds of microbes that exist at a contaminated site will result in a more efficient, effective, and lower cost cleanup.


 A Multi-Step Process - Once contamination enters the environment, the natural ecological system (including the microbial community) begins either to slowly adapt or is poisoned by high levels of toxic chemicals that usually exist closest to the source. Furthermore, the microbes that function best in one environment can be sluggish in another, even though both may be needed to destroy the contamination. For example, if the contamination is in an environment where oxygen is abundant, highly aerobic (oxygen-loving) microbes are probably flourishing while those that thrive in oxygen-depleted atmospheres (anaerobic) languish. However, both may be needed to complete a successful remedy, as one type of microbe usually cannot accomplish the whole job.


 Three Principles - LBSI has devised a unique process to use microbial consortia to remediate contaminated sites. Often over 350 non-pathogenic bacteria, fungi, protozoa, and algae are used. LBSI's process is based on three principles: balancing the ecosystem, restoring the soil's healthy carrying capacity, and finding processes that treat both organic and inorganic contamination.


 Microbial Consortia - Bioremediation using microbial consortia employs a series of complex transformations to destroy or immobilize the contaminants. Each step of the transformations generates intermediate by-products which, in turn, must be degraded to end products of carbon dioxide and water. Many transformations require the participation of numerous and specific microbes. If these microbes are too weak to perform in their desired roles, the destruction will be incomplete, often leaving by-products that are more toxic than the original contamination. For instance, Total Petroleum Hydrocarbon (TPH) degraders may readily transform a diesel spill into its intermediate chemical components, but these components (benzene, toluene, ethylbenzene, and xylenes) are more hazardous than the original diesel. Using only one or two microbes to destroy the contamination, or force-feeding the microbes only a single component of their diet (e.g., oxygen) may feed one set of degraders at the expense the others, causing large-scale die-off in a critical component of the microbial community. Hence, microbes needed to perform the final degradation of these intermediate toxins will languish.


 A Systems Approach - For the cleanup to be achieved within a reasonable time frame without the threat of persistent, undesirable by-products, the entire system must be optimized. Recently we have found that Aroclor 1260, a tenacious PCB, can be effectively bioremediated by 51 individual microbes (including bacteria, fungus, protozoa, and algae) in a 35-step process.It's no wonder one or two engineered microbes can't get the job done. In addition, by using only a few microbes or a single stimulant, contaminants that are not targeted can be mobilized unintentionally. For example, treating for a single metal could mobilize other metals. The solution is to apply a consortium of microbes that employs a systems approach to the cleanup.


 Hybridization - WSI employed LBSI's optimization technique that takes microbes from the site that have adapted to moderate levels of contamination and uses them in the laboratory to build a resilient community. Those microbes that are not rigorous enough to perform the cleanup can be hybridized with their pure strains, purchased specifically for that purpose. Hybridization makes them work faster and more efficiently in moderate contamination and makes them able to tolerate the high levels of contamination that they would normally find toxic.


 Acclimation- Starting with uncontaminated soils, over a few weeks, progressively higher concentrations of contaminated soils are introduced into the mixture until the microbes are able to withstand the highest levels of contamination found at the site. These acclimated microbes are combined with a mixture of nutrients, enzymes, vitamins, and food, and become the "inoculum". The optimized microbes, as part of the inoculum, are re-introduced to the site. As the microbial community thrives, it digests, de-toxifies, or immobilizes the different chemical components in the contamination, which it uses as fuel. As this food source is consumed, the contamination concentrations decrease and the microbes die back to the population levels that existed at the site before it was contaminated, known as its "Carrying Capacity".


 That's how it all works. LBSI's approach has been successfully applied at hundreds of contaminated sites around the country. Each project results in their adding more microbes and functions to their existing database of over 15,000 entries. Check out some of the project descriptions of bioremediation with microbial consortia found on the HOT SPOTS page.




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Jo Davison of LBSI in her lab
Waste Science Inc. formed a strategic alliance with Lambda Bioremediation Systems, Inc. (LBSI) to offer this technology at a wide variety of sites.The picture above shows LBSI's Research Director, Jo Davison, in her laboratory.



Click here to watch a video of microbes consuming contamination.


Thoughtful and well-engineered bioremediation that enhances and optimizes the viability of all necessary microbes will result in a successful remediation over the shortest time frame. If you would like more information on this approach, please contact Katy Makeig or biologist Jo Davison at LBSI's website: www.lambdabio.com



Email Katy Makeig,
Former WSI President


Email LBSI